Sequence::countStates Struct Reference

Functor to count the number of states, excluding gaps and missing data, in a range of characters. More...

#include <PolyFunctional.hpp>

List of all members.

Public Member Functions
template<typename charItr >
stateCounter	operator() (charItr beg, charItr end, const bool &haveOutgroup=false, const size_t &outgroup=0)

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Detailed Description

Functor to count the number of states, excluding gaps and missing data, in a range of characters.

Definition at line 46 of file PolyFunctional.hpp.

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Member Function Documentation

template<typename charItr >

stateCounter Sequence::countStates::operator()	(	charItr	beg,
		charItr	end,
		const bool &	haveOutgroup = false,
		const size_t &	outgroup = 0
	)			[inline]

Parameters:

	beg	beginning of a range of characters
	end	end of a range of characters
	haveOutgroup	true of one of the elements of site is an outgroup state, false otherwise
	outgroup	the index of the outgroup sequence in site

Note:

will return an empty object if beg>=end or beg+outgroup>=end

Definition at line 53 of file PolyFunctional.hpp.

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The documentation for this struct was generated from the following file:

• PolyFunctional.hpp