Data from a single locus for an HKA test.
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#include <Sequence/HKA.hpp>
List of all members.
Public Member Functions |
| | HKAdata () |
| | HKAdata (const HKAdata &d) |
| | HKAdata (unsigned sa, unsigned sb, double d, unsigned na, unsigned nb) |
Public Attributes |
| unsigned | SA |
|
unsigned | SB |
| double | D |
| unsigned | nA |
|
unsigned | nB |
Detailed Description
Data from a single locus for an HKA test.
Data from a single locus for an HKA test
Definition at line 37 of file HKA.hpp.
Constructor & Destructor Documentation
| Sequence::HKAdata::HKAdata |
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default constructor
Definition at line 57 of file HKA.cc.
| Sequence::HKAdata::HKAdata |
( |
const HKAdata & |
d |
) |
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copy constructor
Definition at line 64 of file HKA.cc.
| Sequence::HKAdata::HKAdata |
( |
unsigned |
sa, |
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unsigned |
sb, |
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double |
d, |
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unsigned |
na, |
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unsigned |
nb | |
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) |
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- Parameters:
-
| sa | Num. polymorphic sites in species a |
| sb | Num. polymorphic sites in species b |
| d | Divergence between species a and b (per locus) |
| na | sample size for species a |
| nb | sample size for species b |
Definition at line 71 of file HKA.cc.
Member Data Documentation
D is a measure of divergence between species A and B, i.e. mean pairwise differences
Definition at line 48 of file HKA.hpp.
The sample sizes in species A and B
Definition at line 52 of file HKA.hpp.
SA is the number of polymorphic sites in species A, SB is the same quantity for species B
Definition at line 43 of file HKA.hpp.
The documentation for this struct was generated from the following files:
