Sequence::sambits Namespace Reference
[High-throughput sequencing]

Stores the hex flags used by a SAM file flag field in an easy-to-read format. More...

Variables

static const int is_paired = 0x0001
static const int is_proper_pair = 0x0002
static const int query_unmapped = 0x0004
static const int mate_unmapped = 0x0008
static const int qstrand = 0x0010
static const int mstrand = 0x0020
static const int first_read = 0x0040
static const int second_read = 0x0080
static const int not_primary = 0x0100
static const int qcfail = 0x0200
static const int duplicate = 0x0400

Detailed Description

Stores the hex flags used by a SAM file flag field in an easy-to-read format.

Generated on Thu Aug 11 13:22:05 2011 for libsequence by  doxygen 1.6.3