Miscellany

Files
file	Comparisons.hpp
	delcaration of routines for comparing DNA sequences This file declares a set of functions useful for comparing two bits of sequence data--sequences, nucleotides, etc.
Functions
std::string	Sequence::Translate (std::string::const_iterator beg, std::string::const_iterator end, Sequence::GeneticCodes genetic_code, const char &gapchar) throw (Sequence::SeqException)

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Function Documentation

std::string Sequence::Translate	(	std::string::const_iterator	beg,
		std::string::const_iterator	end,
		Sequence::GeneticCodes	genetic_code = Sequence::UNIVERSAL,
		const char &	gapchar = '-'
	)			throw (Sequence::SeqException)

Parameters:

	beg	a pointer to the beginning of the region to translate
	end	a pointer to 1 past the end of the region to translate
	genetic_code	must be a value from the enumeration list Sequence::GeneticCodes
	gapchar	a character representing an alignment gap

Returns:

a string representing the translation of the range

Exceptions:

Sequence::SeqException

if genetic_code is invalid #include <Sequence/Translate.hpp>