#include <Sequence/Coalescent/SimTypes.hpp>#include <vector>#include <memory>Go to the source code of this file.
Namespaces | |
| namespace | Sequence |
The namespace in which this library resides. | |
Functions | |
| double | Sequence::total_time (const marginal::const_iterator beg, const int &nsam) |
| Calculate total time on a marginal tree. | |
| int | Sequence::pick_branch (marginal::const_iterator beg, const int &nsam, const double &rtime) |
| pick a random branch of a marginal tree | |
| std::vector< int > | Sequence::get_all_descendants (marginal::const_iterator beg, const int &nsam, const int &branch) |
| Find all the descendants of a branch on a marginal tree. | |
| bool | Sequence::is_descendant (marginal::const_iterator beg, const int &ind, const int &branch) |
| Ask if a tip of a tree is a descendant of a particular branch. | |
| double | Sequence::total_time_on_arg (const Sequence::arg &sample_history, const int &total_number_of_sites) |
| Returns the total time on an ancestral recombination graph. | |
| void | Sequence::minimize_arg (Sequence::arg *sample_history) |
Things you may want to do with marginal trees in a coalescent simulations
Definition in file TreeOperations.hpp.
1.6.3